PDACMolecularOmniClassifier
v2.5.1
Upload a tsv file with genes in rows and samples in columns (max. 1GB)
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Do you want to apply batch correction?
Yes
No
Select the gene ID type
EnsemblID
EntrezID
GeneSymbol
Select one or more tumor classifiers
Collisson
Moffitt
Bailey
Puleo
Chan-Seng-Yue
PDAConsensus
Do you want to include stroma classification?
Yes
No
Select one or more stroma classifiers
Moffitt
Maurer
PDAConsensus
Run classification
See also:
GitHub
Tumor/Stroma proportions
Download tumor/stroma proportions
Tumor classification
Collisson
Moffitt
Bailey
Puleo
Chan-Seng-Yue
PDAConsensus
*In red when the probability is below a predefined treshold (70% for Moffitt and PDAConsensus, 50% for Collisson, 33% for Bailey, and 30% for Puleo and Chan-Seng-Yue)
Download Collisson classification
Download Moffitt classification
Download Bailey classification
Download Puleo classification
Download Chan-Seng-Yue classification
Download PDAConsensus classification
Overview tumor classification
Stroma classification
Stroma Moffitt
Stroma Maurer
Stroma PDAConsensus
*In red when the probability is below a predefined threshold (70%)
Dowload Moffitt stroma classification
Dowload Maurer stroma classification
Download PDAConsensus stroma classification
Overview stroma classification
Reset app